Essential oils in the management of soft rot of kale in the brazilian semiarid region / Óleos essenciais no manejo da podridão mole em couve no semiárido brasileiro

The aim of this study was to analyze the effect of essential oils on the control of soft rot of kale. Clove essential oil at 0.25%, lemongrass and palmarosa essential oils at 0.5%, melaleuca and orange essential oils at 0.75%, bergamot, rosemary, sage and ginger essential oils at 1% were evaluated for the in vitro inhibition of Pectobacterium carotovorum subsp. brasiliensis (Pcb) and control of soft rot of kale, sprayed 72 hours before or seven hours after inoculation. Clove, citronella, bergamot, rosemary, palmarosa, sage, melaleuca, and lemongrass oils completely inhibited the growth of Pcb. Lemongrass oil (0.5%) caused 0% of disease incidence (INC), providing 100% of disease control in both periods of inoculation. Clove oil (0.25%) showed a lower INC (25%) when applied after inoculation, providing a control percentage of 71.42%. The lemongrass and clove essential oils were analyzed by GC/FID (Gas Chromatography ­ Flame Ionization Detector) and by GC/MS (Gas Chromatography /Mass Spectrometer). The major components were eugenol (91,9%) for clove oil and citral, isometric mixture of neral (34,1%) and geranial (42,9%) for lemongrass oil. The Minimum inhibitory concentration (MIC) of lemongrass, clove oils and their major components (citral and eugenol, respectively) was determined by using a broth macrodilution technique, as well as they were evaluated at different concentrations on the control of soft rot of kale, sprayed according descriptions above. The MIC was 0.03125% for citral, and 0.0625 and 0.125% for lemongrass and clove oils, respectively. Eugenol didn't show MIC. Lemongrass oil at 0.125% (post-inoculation) and citral at 0.125% (pre and post-inoculation) provided the highest percentages of disease control (33.33, 50, and 100%, respectively). Clove oil at 0.125% (post-inoculation) showed better effectiveness than eugenol (0.25%), providing a percentage of disease control of 16.67%. Lemongrass and clove essential oils were the most effective in control of soft rot of kale, suggesting that these oils have a potential to be used as antibacterial agents.

O objetivo do estudo foi avaliar o efeito de óleos essenciais no controle da podridão mole em couve. Os óleos essenciais de cravo a 0,25%, capim-limão e palmarosa a 0,5%, citronela, melaleuca e laranja a 0,75%, bergamota, alecrim, sálvia e gengibre a 1% foram avaliados na inibição in vitro de Pectobacterium carotovorum subsp. brasiliensis (Pcb) e controle da podridão mole em couve, pulverizados 72 horas antes ou sete horas após a inoculação. Os óleos essenciais de cravo, citronela, bergamota, alecrim, palmarosa, sálvia, melaleuca e capim-limão inibiram completamente o crescimento de Pcb. O óleo de capimlimão (0,5%) promoveu 0% de incidência (INC) da doença (percentual de controle de 100%), em ambos os períodos de inoculação. O óleo de cravo (0,25%) proporcionou menor INC (25%) quando aplicado após inoculação (percentual de controle de 71,42%). Os óleos essenciais de capim-limão e cravo foram analisados por GC/FID (cromatografia gasosa/detector por ionização de chama) e por GC/MS (cromatografia gasosa/ espectometria de massas). Os componentes majoritários foram eugenol (91,9%) no óleo de cravo e citral (neral34,1% e geranial- 42,9%) no óleo de capim-limão. A concentração inibitória mínima (CIM) dos óleos essenciais de capim-limão e cravo e de seus componentes majoritários (citral e eugenol, respectivamente) foi determinada por meio da técnica de macrodiluição em caldo, bem como foram avaliados, em diferentes concentrações, no controle da podridão mole em couve, pulverizados conforme descrito acima. A concentração inibitória mínima (CIM) foi de 0,03125% para o citral, e de 0,0625 e 0,125% para os óleos de capim-limão e cravo, respectivamente. O eugenol não apresentou CIM. O óleo de capim-limão a 0,125% (pós-inoculação) e o citral (0,125%), em ambos os períodos de inoculação, proporcionaram os maiores percentuais de controle (33,33; 50 e 100%, respectivamente). O óleo de cravo a 0,125% (pós-inoculação) mostrou maior eficiência que o eugenol (0,25%), promovendo um percentual de controle de 16,67%. Os óleos essenciais de capim-limão e cravo destacaram-se na eficiência de controle da podridão mole em couve, sugerindo que esses óleos têm potencial para serem utilizados como agentes antibacterianos.

Purification and bacteriostatic identification of CpxP protein from Pectobacterium carotovorum subsp. carotovorum / 生物工程学报

Pectobacterium carotovorum subsp. carotovorum is one of the world's top ten plant pathogens, mainly infecting cruciferous economic crops and ornamental flowers. In this study, an antibacterial gene cpxP (Gene ID: 29704421) was cloned from the genome of Pectobacterium carotovorum subsp. carotovorum, and constructed on the prokaryotic expression plasmid pET-15b, and the recombinant plasmid was transformed into Escherichia coli BL21 (DE3), then stability and bacteriostatic experiments of the purified CpxP protein were performed. The final concentration of IPTG was 1 mmol/L, obtaining high-efficiency exogenous expression of the CpxP protein. There was no other protein after purification, and the destined protein exhibited good thermal stability and pH stability. The antibacterial test results showed that the inhibition rate of the CpxP protein on carrot slice was 44.89% while the inhibition rate on potato slice was 59.41%. To further explain its antibacterial mechanism, studying the spatial structure of this protein can provide new ideas for the control of soft rot and new protein pesticide targets.

Chinoketides A and B, Two New Antimicrobial Polyketides from the Endophytes of Distylium chinense with the “Black-Box” Co-culture Method

Two new polyketides, chinoketides A and B (1 – 2) with a known compound xylarphthalide A (3), were isolated from the solid medium of the endophytes from the leaves of the relic plant Distylium chinense with the “black-box” co-culture method, and the structures of two new compounds were elucidated by NMR, MS and CD spectra. And the absolute configurations of chinoketides A (1) and B (2) were determined as 2R,3R,8S and 5R,6S by calculating their ECD spectra to compare with the experimental CD spectra. Finally, the antimicrobial activities were evaluated to Erwinia carotovora sub sp. Carotovora (Jones) Bersey et al, and the results showed that compounds 1 – 3 displayed the antimicrobial activities with MIC value at 20.5, 30.4 and 10.2 µg/mL.

Draft genome of a South African strain of Pectobacterium carotovorum subsp. brasiliense

Abstract The draft genome of Pectobacterium carotovorum subsp. brasiliense (Pcb) which causes blackleg of potato was submitted to the NCBI and released with reference number NZ_LGRF00000000.1. The estimated genome size based on the draft genome assembly is 4,820,279 bp from 33 contigs ranging in length from 444 to 1,660,019 nucleotides. The genome annotation showed 4250 putative genes, 4114 CDS and 43 pseudo-genes. Three complete rRNA gene species were detected: nine 5S, one 16S and one 23S. Other partial rRNA gene fragments were also identified, nine 16S rRNA and three 23S rRNA. A total of 69 tRNA genes and one ncRNA gene were also annotated in this genome.

Water Extract from Spent Mushroom Substrate of Hericium erinaceus Suppresses Bacterial Wilt Disease of Tomato

Culture filtrates of six different edible mushroom species were screened for antimicrobial activity against tomato wilt bacteria Ralstonia solanacearum B3. Hericium erinaceus, Lentinula edodes (Sanjo 701), Grifola frondosa, and Hypsizygus marmoreus showed antibacterial activity against the bacteria. Water, n-butanol, and ethyl acetate extracts of spent mushroom substrate (SMS) of H. erinaceus exhibited high antibacterial activity against different phytopathogenic bacteria: Pectobacterium carotovorum subsp. carotovorum, Agrobacterium tumefaciens, R. solanacearum, Xanthomonas oryzae pv. oryzae, X. campestris pv. campestris, X. axonopodis pv. vesicatoria, X. axonopodis pv. citiri, and X. axonopodis pv. glycine. Quantitative real-time PCR revealed that water extracts of SMS (WESMS) of H. erinaceus induced expressions of plant defense genes encoding beta-1,3-glucanase (GluA) and pathogenesis-related protein-1a (PR-1a), associated with systemic acquired resistance. Furthermore, WESMS also suppressed tomato wilt disease caused by R. solanacearum by 85% in seedlings and promoted growth (height, leaf number, and fresh weight of the root and shoot) of tomato plants. These findings suggest the WESMS of H. erinaceus has the potential to suppress bacterial wilt disease of tomato through multiple effects including antibacterial activity, plant growth promotion, and defense gene induction.

Bacillus thuringiensis: en el manejo del agente de la pudrición blanda de la papa Erwinia carotovora / Bacillus thuringiensis control of the potato soft rot Erwinia carotovora

En Colombia el cultivo de papa es el cuarto en importancia en la economía del país, y su producción alcanza las 300 millones de toneladas aproximadamente. Erwinia carotovora es una bacteria Gram negativa, anaeróbica facultativa causante de la pudrición blanda de la papa, puede llegar a generar hasta el 100% de daño en la cosecha, lo cual ocasiona grandes pérdidas económicas. Se ha establecido que la bacteria Bacillus thuringiensis es capaz de suprimir la virulencia de E. caratovora debido a que produce N-acil-homoserina-lactonasa, una potente enzima que degrada de N-acil-homoserinolactonas, que son indispensables en el mecanismo de quorum-sensing de E. caratovora. Esta circunstancia, puede ser una alternativa importante para el control de la enfermedad de la pudrición blanda de la papa. Considerando lo anterior, en este artículo se describe el proceso que emplea la bacteria Bacillus thuringiensis para inhibir la actividad de E. caratovora.

In Colombia the potato crop is the fourth in importance in the economy of the country, its production reached 300 million tons. Erwinia carotovora is a Gram-negative bacterium, facultative anaerobic which causes the soft rotting of the potato; it can potentially generate up to 100% damage in the crop, which causes large economic losses. It has been established that the bacterium Bacillus thuringiensis is able to suppress the virulence of E. caratovora because it produces N-acyl-homoserine-lactonasa, a powerful enzyme that degrades of N-acyl-homoserinolactonas, which are indispensable in the quorum-sensing mechanism of E. caratovora. This can be an important alternative for the control of the disease of the soft rotting of the potato. Considering the above, this article describes the process used by the bacterium B. thuringiensis to inhibit the activity of E. caratovora.

Essential Oil Prepared from Cymbopogon citrates Exerted an Antimicrobial Activity Against Plant Pathogenic and Medical Microorganisms

Essential oils are mixtures of volatile, lipophilic compounds originating from plants. Some essential oils have useful biological activities including antimicrobial, spasmolytic, antiplasmodial, and insect-repelling activities. In this study, we tested the antimicrobial activity of essential oil prepared from the aromatic plant, Cymbopogon citrates, against three important plant pathogenic and medical microorganisms, Pectobacterium carotovorum, Colletotrichum gloeosporioides, and Aspergillus niger. It effectively inhibited the growth of the bacterium, Pectobacterium carotovorum, in a dose-dependent fashion, and 0.5% of the oil inhibited the growth of bacteria completely. Similarly, the essential oil inhibited the growth of plant pathogenic fungus, Colletotrichum gloeosporioides, and the addition of 1% of essential oil completely inhibited the growth of fungus even after 5 days of culture. Finally, it effectively inhibited the growth of the medically and industrially important fungal species, Aspergillus spp. These results suggest that the essential oil from Cymbopogon citrates may be an environmentally safe alternative to inhibit antimicrobial agents for various uses.

Defense mechanisms of Solanum tuberosum L. in response to attack by plant-pathogenic bacteria

The natural resistance of plants to disease is based not only on preformed mechanisms, but also on induced mechanisms. The defense mechanisms present in resistant plants may also be found in susceptible ones. This study attempted to analyze the metabolic alterations in plants of the potato Solanum tuberosum L. cv. Agata that were inoculated with the incompatible plant-pathogenic bacteria X. axonopodis and R. solanacearum, and the compatible bacterium E. carotovora. Levels of total phenolic compounds, including the flavonoid group, and the activities of polyphenol oxidase (PPO) and peroxidase (POX) were evaluated. Bacteria compatibility was evaluated by means of infiltration of tubers. The defense response was evaluated in the leaves of the potato plants. Leaves were inoculated depending on their number and location on the stem. Multiple-leaf inoculation was carried out on basal, intermediate, and apical leaves, and single inoculations on intermediate leaves. Leaves inoculated with X. axonopodis and with R. solanacearum showed hypersensitive responses within 24 hours post-inoculation, whereas leaves inoculated with E. carotovora showed disease symptoms. Therefore, the R. solanacearum isolate used in the experiments did not exhibit virulence to this potato cultivar. Regardless of the bacterial treatments, the basal leaves showed higher PPO and POX activities and lower levels of total phenolic compounds and flavonoids, compared to the apical leaves. However, basal and intermediate leaves inoculated with R. solanacearum and X. axonopodis showed increases in total phenolic compounds and flavonoid levels. In general, multiple-leaf inoculation showed the highest levels of total phenolics and flavonoids, whereas the single inoculations resulted in the highest increase in PPO activity. The POX activity showed no significant difference between single- and multiple-leaf inoculations. Plants inoculated with E. carotovora showed no significant increase ...

Purification and characterization of L-asparaginase from erwinia carotovora

An L-asparaginase from Erwinia carotovora was successively purified by ammonium sulfate precipitation, DEAE-cellulose and Sephacryl S-200 columns. The specific activity of the L-asparaginase was increased approximately 55-fold, from 15.5 to 852 U/mg proteins. SDS-PAGE showed that the purified L-asparaginase was homogeneous and the molecular weight was about 115 kDa. The isoelectric point [pI] of the enzyme was about 5.9. Characterization of the enzyme exhibited optimum pH and temperature of 8.4 and 40°C, respectively. The purified enzyme is able to prolong its thermal stability up to 50°C. A Lineweaver-Burk analysis showed a K[m] value of 0.154 mM and V[max] of 41.67 U. The purified enzyme was rich in glycine, alanine, glutamic acid and aspartic acid

Podridão-mole em plantas de cebolinha causada por Pectobacterium carotovorumsubsp. carotovorum em Roraima / Soft rot of bunching onion plants caused by Pectobacterium carotovorumsubsp. carotovorum in Roraima, Brazil

A ocorrência de Pectobacterium carotovorum subsp. carotovorum (=Erwinia carotovora subsp. carotovora) em cebolinha (Allium fistulosum) é relatada pela primeira vez na região norte do Brasil. Até então sua ocorrência estava registrada apenas no Distrito Federal.

This is the first report of Pectobacterium carotovorum subsp. carotovorum (=Erwinia carotovora subsp. carotovora) causing soft rot of bunching onion (Allium fistulosum) plants in Roraima, Brazil. Its occurrence is reported only in Distrito Federal.

Purification of L-asparaginase from a bacteria Erwinia carotovora and effect of a dihydropyrimidine derivative on some of its kinetic parameters.

L-Asparaginase shows antileukemic activity and is generally administered in the body in combination with other anticancer drugs like pyrimidine derivatives. In the present study, L-asparaginase was purified from a bacteria Erwinia carotovora and the effect of a dihydropyrimidine derivative (1-amino-6-methyl-4-phenyl-2-thioxo, 1,2,3,4-tetrahydropyrimidine-5-carboxylic acid methyl ester) was studied on the kinetic parameters Km and Vmax of the enzyme using L-asparagine as substrate. The enzyme had optimum activity at pH 8.6 and temperature 35 degrees C, both in the absence and presence of pyrimidine derivative and substrate saturation concentration at 6 mg/ml. For the enzymatic reaction in the absence and presence (1 to 3 mg/ml) of dihydropyrimidine derivative, Km values were 7.14, 5.26, 4.0, and 5.22 M, and Vmax values were 0.05, 0.035, 0.027 and 0.021 mg/ml/min, respectively. The kinetic values suggested that activity of enzyme was enhanced in the presence of dihydropyrimidine derivative.

Expression of gene aiiA carrying the promoter of gene cry3Aa in Bacillus thuringiensis / 生物工程学报

N-acyl-homoserine lactones (AHLs), are widely conserved signal molecules present in quorum-sensing systems of many Gram-negative bacteria. AHLs molecules mediate the expression of virulence genes of a range of bacterial pathogens. Recently, it has been reported that AiiA protein, which widely exists in Bacillus species, can inactivate the AHLs by hydrolyzing the lactone bond of AHLs, thus attenuate the diseases caused by the expression of virulence genes of bacterial pathogens. Bacillus thuringiensis, a type of Gram-positive bacteria, has been used extensively as a microbial insecticide in the last few decades. However, most of important insecticidal B. thuringiensis strains have not been exploited for bacterial disease control because they usually do not produce antibiotics that are effective against bacteria and fungi. The discovery of AiiA protein in B. thuringiensis shows the application potential of B. thuringiensis on biocontrol against bacterial diseases. In this study, in order to construct the B. thuringiensis recombinant strain that has high expression of AiiA protein, the promoter of insecticidal crystal protein coding gene cry3Aa of B. thuringiensis was selected. The promoter of gene cry3Aa is a non-sporulation promoter, it promotes the transcription earlier and longer than the promoters of other cry genes. The promoter of AiiA protein coding gene aiiA was replaced with the promoter of gene cry3Aa by overlapping PCR, resulting fusion gene pro3A-aiiA. The gene pro3A-aiiA was inserted into shuttle vector pHT304 at site BamH I / Sph I , resulting recombinant plasmid pBMB686. The plasmid pBMB686 was introduced into B. thuringiensis acrystalliferous strain BMB171, the resulting strain BMB686 had a higher and more stable expression level of protein AiiA comparing with the parental strain BMB171. Furthermore, the strain BMB686 exhibited stronger ability of AHLs inactivation and much more effective restraint to the potato's soft rot disease caused by Erwinia carotovora than those of the parental strain BMB171. From these results, it was concluded that the B. thuringiensis strain harvesting the fusion gene pro3A-aiiA may be utilized in the future to control bacterial diseases which are mediated by the AHL quorum-sensing signals.

Antibiotics and garlic clove extract--inhibitory agents of cell wall degrading enzymes.

Four antibiotics were tested against Erwinia causing soft rot of onion (Allium cepa var. aggregatum) of which streptomycin sulphate 90% and tetracycline hydrochloride 10% (streptocycline) recorded the maximum inhibition zone of 27.66 mm. In the enzyme studies the maximum inhibition of pectinlyase (PL), polygalacturonase (PG) and protopectinase production was recorded by the same antibiotic. The antibiotics have a significant influence on the production and activity of cell wall degrading enzymes produced by the plant pathogenic microorganisms. Garlic clove extract was equally effective in inhibiting the growth and enzyme production.

Fermentative production and isolation of L-asparaginase from Erwinia carotovora, EC-113.

L-Asparaginase, an enzyme-drug used for the treatment of acute lymphoblastic leukemia was isolated from Erwinia carotovora. The effects of different carbon and nitrogen sources on the fermentative production of the enzyme were studied. Lactose, monosodium glutamate, corn steep liquor, tryptone and yeast extract showed significant stimulation of the production. When L-asparagine (0.2%), a substrate of the enzyme was added to a fermentation medium, a mutant strain EC-113 exhibited 6 times higher production indicating a distinct induction. The enzyme was extracted from the cells and purified about 30 fold to apparent homogeneity employing polyacrylamide gel electrophoresis. The methods used in sequence were DEAE cellulose chromatography, sephadex G-200 gel filtration, hydroxylapatite ion-exchange and affinity chromatography on sepharose CL-6B. The recovery of enzyme was 60%. The purified enzyme showed optimal pH at 8.0 and optimal temperature at 50 degrees C. The Km value of purified enzyme was 1.8 x 10(-5) M. LD50 of purified enzyme in mice by intravenous route was 4,80,000 IU/Kg and repeated treatment at 20,000 IU/Kg by intravenous route did not elicit bone marrow depression or damage to intestinal mucosa. The plasma half life was 14-24 hours and clearance time was 4-5 hours. Purified enzyme shows significant antitumor activity on experimental animal models.

Response of cactus and nicotiana glutinosa leaves to infection by soft rot bacteria

All tested isolates of E. carotovora subsp. carotovora were able to induce hyperseitsitive reactioin [HR] in leaves of cactus and Nicotiana glutinosa plants. Unwashed cells of the less virulent isolate Et of the subsp. carotovora induced HR in cactus leaves after a longer period. Moreover, unwashed cells of E.carotovora subsp. atroseptica isolate Epo2 induced the weakest reaction. When cactus leaves were injected with washed cells of the same isolates the latent period decreased to 3 days and the browning of lesion colour occurred faster, at the 10th day, the more virulent isolates induced HR within a shorter period, whereas with the less virulent isolates, the time required for such reaction was not affected or even increased. When N.glutinosa leaves were injected with unwashed cells of highly [EP2] and moderately [Et] virulent isolates of subsp. carotovora the HR become visible after a short period. This time period increased when the washed cells of those two isolates [EP2 and Et] were used for injection. In contrast E.c.subsp. atroseptica did not induce HR in N.glutinosa leaves. Cell-free culture filtrates prepared of any tested bacterial isolates of both subsp. caused in leaves of cactus and N.glutinosa a HR moderate in intensity and after a shortest time period

Extracellular polysaccharides and agglutination to soft rot bacteria

Erwinia caratovora subsp. carotovora and subsp. atroseptica produced viscous substances in 5% sucrose culture medium. The chemical analysis of alcohol-insoluble precipitate was positive for carbohydrate, negative for protein and consist of xylose and galactose and sometimes of galactose only. The subspecies carotovora produced free-EPS two-three-fold more than the subsp. atroseptica. Exopolysaccharides of the subsp. carotovora was found to cause reversible wilting of tomato cuttings. Moreover, the unwashed cells induced soft rot for potato and pepper fruits two-five fold more than the washed ones, indicating the important role of EPS in pathogenesis. The highest concentration [600 micro, g/ml]of the three buffered fractions [A,B and C] prepared from corn grains strongly agglutinated the bacterial cells of E.carotovora subsp. carotovora and subsp. atroseptica. At the lower concentrations [150 micro.g/ml] of fractions A and C, the washed cells of both subsp. were agglutinated, whereas the unwashed were not. These results indicate the necessity of EPS for full virulence of subsp. carotovora

Effect of some plant extracts on growth and enzyme activities of soft rot bacteria

The water - soluble extracts prepared from com foliage, soybean seeds, cotton foliage and anise seeds inhibited growth of soft rot bacteria. At higher concentrations, 78 mg, 32mg, 80mg and 67 mg dry weight / ml of corn, soybean, cotton and anise extracts respectively the bacterial cells were killed. Moreover, isolated varied greatly in their sensitivity to the substances present in soybean and anise extracts. When the crude extract of soybean seeds was added to the growth medium of E. carotovora subsp. carotovora its population was substantially checked and consequently its total pectolytic and cellulolytic enzyme activities decreased, but not as sharp as its growth. Thus, when the activity was calculated on basis of a constant number of bacterial cells [108 / ml], it appeared that the extract enhanced these enzyme activities. In addition polyphenoloxidase activity of E. carotovora subsp. carotovora was affected by the soybean seed extract almost similarly as in case of pectolytic and cellulolytic enzymes. Contrary to the results obtained with the above enzymes, soybean seed extract supplemented to the growth medium of E.C. subsp. carotovora isolates either strongly or completly inhibited their peroxidase activity